CLC Main Workbench

CLC Main Workbench (was CLC Combined Workbench) aggregates all features of CLC RNA Workbench, CLC Protein Workbench, and CLC Gene Workbench in one integrated software package.

CLC Combined Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with smooth data management, and excellent graphical viewing and output options.

Bug Fixes

• Added a work around to a java issue that occasionally resulted in the Workbench displaying an uninformative error and requiring a restart to continue working.
• Fixed an issue with running BLAST at NCBI where an NCBI-generated error about their CPU usage limit being exceeded was not being reported transparently and a result of "no hits" was being reported instead.
• A fix was applied to avoid an exception in circumstances when the cleanup of downloaded files from BLAST failed.
• The Reverse Translate tool ignored any genetic code specified in the codon frequency tables. All reverse translation would thus default to the standard genetic code.
• When installing a workflow with bundled data, it is no longer possible to select a read-only folder for storing the data.
• Fixed wrong display of "Supported format" when exporting elements from either the Folder Editor or the Local Search Editor.
• Fix of potential wrong file being saved when editing a file found via the Local Search Editor.
• Plots inside reports are now shown with their saved side panel settings.
• Fixed saving different line colors in plots through the side panel.
• Side panel option to show legends for a plot with more than 10 samples is now enabled.
• Fixed an issue that led to an error when rendering plots for empty data sets.
• Fixed an issue where the "Empty Recycle Bin" option was sometimes incorrectly unavailable.